The limitations affecting the height of structures shall not apply to the appurtenant appendages and structures, such as parapet walls, not exceeding three feet in height, chimneys, smokestacks, church spires, flagpoles, television antennas and penthouses for mechanical equipment, or to barns, pole barns, silos and other common farm-related structures, and water tanks; provided, however, that such appendages and structures shall comply with all other provisions of this or any other applicable ordinance. If the provisions or requirements of the Airport Overlay District apply, the exceptions granted in this section no longer apply.